split.cqc_check: Split the result of 'cqc_check' into groups

Description Usage Arguments Examples

View source: R/cqc_check.R

Description

It is used to split samples into separate groups when they can't be reconciled into the same group.

Usage

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## S3 method for class 'cqc_check'
split(x, f, drop = FALSE, ...)

Arguments

x

cqc_check object

f, drop, ...

not used

Examples

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fcs_files <- list.files(system.file("extdata", "GvHD_QC", package = "cytoqc"), full.names = TRUE)
qc_cf_list <- cqc_load_fcs(fcs_files)
channel_groups <- cqc_check(qc_cf_list, type = "channel")
# Show the different groups that will result from the split
summary(channel_groups)
split_groups <- split(channel_groups)
split_groups

RGLab/cytoqc documentation built on Nov. 25, 2020, 11:27 p.m.