cqc_load_fcs: Load cqc_data

Description Usage Arguments Examples

View source: R/cqc_io.R

Description

load fcs or h5 files into cqc_cf_list object which is a list of cytoframe objects. This is the method to construct the core data object for cytoqc.

Usage

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Arguments

files

the fcs or h5 file paths

...

parameters passed to 'load_cytoframe_from_fcs' or 'load_cytoframe'

Examples

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fcs_files <- list.files(system.file("extdata", "GvHD_QC", package = "cytoqc"), full.names = TRUE)
cqc_cf_list <- cqc_load_fcs(fcs_files)
## Not run: 
h5_files <- list.files(system.file("extdata", "gs_bcell_auto", package = "flowWorkspaceData"),
                       pattern = ".h5", full.names = TRUE)
cqc_cf_list <- cqc_load_cytoframe(h5_files)

## End(Not run)

RGLab/cytoqc documentation built on Nov. 25, 2020, 11:27 p.m.