cqc_drop_groups: Remove outlier groups from the result of 'cqc_check'.

Description Usage Arguments Examples

View source: R/cqc_check.R

Description

Remove outlier groups from the result of 'cqc_check'.

Usage

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cqc_drop_groups(groups, id)

Arguments

groups

the object returned by 'cqc_checks'

id

the group id to be dropped from the dataset

Examples

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fcs_files <- list.files(system.file("extdata", "GvHD_QC", package = "cytoqc"), full.names = TRUE)
qc_cf_list <- cqc_load_fcs(fcs_files)
channel_groups <- cqc_check(qc_cf_list, type = "channel")
summary(channel_groups)
channel_groups <- cqc_drop_groups(channel_groups, 2)
channel_groups

RGLab/cytoqc documentation built on Nov. 25, 2020, 11:27 p.m.