summary.cqc_check: Provide the summary view of the cqc_check report.

In RGLab/cytoqc: Quality control and standardization of cytometry data

Provide the summary view of the cqc_check report.

Description

It summarize the itemized check report into group overview. It is automatically triggered by print method of 'cqc_check' result.

Usage

## S3 method for class 'cqc_check'
summary(object, ...)

Arguments

object	qc table returned by cqc_check
...	Additional arguments not for the user. Ignore.

Examples

fcs_files <- list.files(system.file("extdata", "GvHD_QC", package = "cytoqc"), full.names = TRUE)
qc_cf_list <- cqc_load_fcs(fcs_files)

channel_groups <- cqc_check(qc_cf_list, type = "channel")
summary(channel_groups)

RGLab/cytoqc documentation built on Jan. 25, 2023, 11:05 p.m.