Man pages for RGLab/cytoqc
Quality control and standardization of cytometry data
| cf_get_panel | Extract channel/marker info from a cytoframe object |
| cqc_cf_list | Construct a 'cqc_cf_list' object from a list of 'cytoframe'... |
| cqc_check | Perform a QC check on flow data. |
| cqc_cluster | Cluster groups based on the result of cqc_check |
| cqc_delete | Delete methods for cyto data |
| cqc_drop_groups | Remove outlier groups from the result of 'cqc_check'. |
| cqc_fix | Apply the cqc_solution |
| cqc_fix_panel | Update panel info |
| cqc_get_data | Extract the data from the result of a 'cqc_check' call. |
| cqc_gs | Construct a 'cqc_gs' object from a 'GatingSet' |
| cqc_gs_list | Construct a 'cqc_gs_list' object from a list of 'GatingSet'... |
| cqc_insert | insertion methods for cyto data |
| cqc_load_fcs | Load cqc_data |
| cqc_match | find the the difference between the reference and target... |
| cqc_match_update | Manual update/delete the match report |
| cqc_plot | Specialized plots for objects from the 'cytoqc' package |
| cqc_recommend | Find solution to resolve the discrepancy discovered by... |
| cqc_set_panel | Update panel info |
| cqc_update | Update methods for cyto data |
| cqc_write_fcs | Write out tidied flow data ('cqc_cf_list') back to fcs or h5 |
| cytoqc-package | cytoqc: Quality control and standardization of cytometry data |
| diff.cqc_check | Display the differences among QC groups |
| knit_print.cqc_check_summary | Customized knit print for cqc_check_summary |
| plot_diff | visualize the tree structure difference among the GatingSets |
| split.cqc_check | Split the result of 'cqc_check' into groups |
| split.cqc_cluster | Split the result of 'cqc_cluster' into groups |
| summary.cqc_check | Provide the summary view of the cqc_check report. |
