gs_check_redundant_nodes: try to determine the redundant terminal(or leaf) nodes that...

In RGLab/flowWorkspace: Infrastructure for representing and interacting with gated and ungated cytometry data sets.

try to determine the redundant terminal(or leaf) nodes that can be removed

Description

These leaf nodes make the gating trees to be different from one another and can be removed by the subsequent convevient call gs_remove_redundant_nodes.

Usage

gs_check_redundant_nodes(x, path = "auto", ...)

Arguments

x	GatingSet or list of groups(each group is a list of 'GatingSet'). When it is a list, it is usually the outcome from gs_split_by_tree.
path	argumented passed to gs_get_pop_paths. The default value is "auto".
...	other arguments passed to gs_get_pop_paths.

Value

a list of the character vectors inicating the nodes that are considered to be redundant for each group of GatingSets.

Examples

## Not run: 
gslist <- list(gs1, gs2, gs3, gs4, gs5)
gs_groups <- gs_split_by_tree(gslist)
toRm <- gs_check_redundant_nodes(gs_groups)

## End(Not run)

RGLab/flowWorkspace documentation built on March 17, 2024, 2:24 p.m.