logicle_trans: logicle transformation.

In RGLab/flowWorkspace: Infrastructure for representing and interacting with gated and ungated cytometry data sets.

logicle transformation.

Description

Used for construct logicle transform object.

Usage

logicle_trans(..., n = 6, equal.space = FALSE)

Arguments

...	arguments passed to logicleTransform.
n	desired number of breaks (the actual number will be different depending on the data range)
equal.space	whether breaks at equal-spaced intervals

Value

a logicle transformation object

Examples

trans.obj <- logicle_trans(equal.space = TRUE)
data <- 1:1e3
brks.func <- trans.obj[["breaks"]]
brks <- brks.func(data)
brks # logicle space displayed at raw data scale
#transform it to verify the equal-spaced breaks at transformed scale
print(trans.obj[["transform"]](brks))

RGLab/flowWorkspace documentation built on March 17, 2024, 2:24 p.m.