In RTCGA/RTCGA: The Cancer Genome Atlas Data Integration

htmltools::tagList(rmarkdown::html_dependency_font_awesome())
library(knitr)
opts_chunk$set(
    comment = "",
    fig.width = 12, 
    message = FALSE,
    warning = FALSE,
    tidy.opts = list(
        keep.blank.line = TRUE, 
        width.cutoff = 150
        ),
    options(width = 200),
    eval = TRUE
)

Data packages not yet submitted to Bioconductor from 2016-01-28 release date of TCGA data.

• RTCGA.mutations.20160128
• RTCGA.rnaseq.20160128
• RTCGA.clinical.20160128
• RTCGA.mRNA.20160128
• RTCGA.miRNASeq.20160128
• RTCGA.RPPA.20160128
• RTCGA.CNV.20160128
• RTCGA.methylation.20160128

Data packages submitted to Bioconductor from 2015-11-01 release date of TCGA data.

• RTCGA.mutations
• RTCGA.rnaseq
• RTCGA.clinical
• RTCGA.PANCAN12
• RTCGA.mRNA
• RTCGA.miRNASeq
• RTCGA.RPPA
• RTCGA.CNV
• RTCGA.methylation

RTCGA/RTCGA documentation built on Nov. 1, 2022, 8:15 p.m.