prepare_priors: Prepare priors

In RajLabMSSM/echofinemap: echoverse module: Fine-mapping functions

Prepare priors

Description

Prepare values to be used as per-SNP priors probabilities in fine-mapping.

Usage

prepare_priors(
  dat,
  priors_col = NULL,
  snp_col = "SNP",
  rescale_priors = TRUE,
  verbose = TRUE
)

Arguments

dat	Fine-mapping results data.
priors_col	[Optional] Name of the a column in dat to extract SNP-wise prior probabilities from.
snp_col	Name of the SNP column.
rescale_priors	If prior probabilities are supplied, rescale them from 0-1 (i.e. rescaled_priors = priors / sum(priors)).
verbose	Print messages.

RajLabMSSM/echofinemap documentation built on Jan. 3, 2023, 1:42 a.m.