RHermesIL-class: RHermesIL
In RogerGinBer/RHermes: Improving metabolome characterization using molecular formula databases
RHermesIL-class R Documentation
RHermesIL
Description
The RHermesIL contains an inclusion list (IL) to perform the MS2
experiment with it. It also contains information about whether adduct
annotations have been prioritized over others, restricted, etc.
Usage
## S4 method for signature 'RHermesIL'
show(object)
Arguments
object
An RHermesIL object
Details
Should not be created directly by the user. Instead, use generateIL.
Value
An RHermesIL object
Slots
ILThe inclusion list itself
annotationA list of the SOIs corresponding to each IL entry
SOInumWhich SOI list was used to generate the IL
ILParamAn ILParam object containing all IL generation parameters
Author(s)
Roger Gine
See Also
generateIL exportIL plotIL filterIL ILParam
Other Containers:
RHermesMS2Exp-class,
RHermesPL-class,
RHermesSOI-class
Examples
RHermesIL() #Do NOT generate an IL object directly
IL(struct, 1) #Access the object using the getter function.
RogerGinBer/RHermes documentation built on Nov. 6, 2022, 11:34 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| RHermesIL-class | R Documentation |
RHermesIL
Description
The RHermesIL contains an inclusion list (IL) to perform the MS2 experiment with it. It also contains information about whether adduct annotations have been prioritized over others, restricted, etc.
Usage
## S4 method for signature 'RHermesIL' show(object)
Arguments
object |
An RHermesIL object |
Details
Should not be created directly by the user. Instead, use generateIL.
Value
An RHermesIL object
Slots
ILThe inclusion list itself
annotationA list of the SOIs corresponding to each IL entry
SOInumWhich SOI list was used to generate the IL
ILParamAn ILParam object containing all IL generation parameters
Author(s)
Roger Gine
See Also
generateIL exportIL plotIL filterIL ILParam
Other Containers:
RHermesMS2Exp-class,
RHermesPL-class,
RHermesSOI-class
Examples
RHermesIL() #Do NOT generate an IL object directly IL(struct, 1) #Access the object using the getter function.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.