RHermesSOI-class: RHermesSOI

In RogerGinBer/RHermes: Improving metabolome characterization using molecular formula databases

RHermesSOI

Description

The RHermesSOI class contains the SOI list, some precalculated information for plotting (in functions such as plotSOI)

Usage

## S4 method for signature 'RHermesSOI'
show(object)

Arguments

object

A RHermesSOI object

Value

An RHermesSOI object

Slots

SOIList

The SOI list itself.

PlotDF

A dataframe contaning all SOI data points with annotations, ready to be plotted when needed.

SOIParam

A SOIParam object containing all information about SOI generation

filename

The filename of the mzML used to generate the SOI list.

Author(s)

Roger Gine

See Also

findSOI plotSOI plotIso

Other Containers: RHermesIL-class, RHermesMS2Exp-class, RHermesPL-class

Examples

RHermesSOI() #Do NOT generate a SOI object directly, use findSOI
SOI(struct, 1) #Access the object using the getter function.

RogerGinBer/RHermes documentation built on April 5, 2025, 10:16 a.m.