filterIL: filterIL

In RogerGinBer/RHermes: Improving metabolome characterization using molecular formula databases

filterIL

Description

Filters out IL entries lower than a specified intensity in a given RT interval.

Usage

filterIL(struct, id, rts, minint = Inf)

## S4 method for signature 'RHermesExp,numeric,numeric'
filterIL(struct, id, rts, minint = Inf)

Arguments

struct	The RHermesExp object.
id	The IL ID in the RHermesExp object. The IDs are assigned by the order in which the IL are generated.
rts	Time interval to filter (two numeric values - start, end), in seconds
minint	Minimum entry intensity to be retained. All entries <= minint will be removed in the specified rt interval. Defaults to infinity, so all IL entries in the range are removed.

Value

Nothing. As a side effect, it generates one/multiple .csv files with the inclusion list data

Examples

if(FALSE){
filterIL(myHermes, 1, c(0,200), minint = 1e6)
}

RogerGinBer/RHermes documentation built on Nov. 6, 2022, 11:34 a.m.