predictionVsCageHits: Plot top tissues

In Roleren/uORFomePipe: uORF prediction in R

Plot top tissues

Description

Shows max 20 tissues candidate and predicted uORF counts And start and stop codon usage for combined prediction

Usage

predictionVsCageHits(
  saveName = p("differential_", mode, "_usage.png"),
  mode = "uORF",
  prediction = predictUorfs(mode = mode),
  stop.codons = FALSE,
  sort.by = "counts"
)

Arguments

saveName	full name of location to save to, default "differential_uORF_usage.png"
prediction	data.table of prediction values in c(0, 1).
stop.codons	= FALSE, if TRUE add a row of stop codon plots

Roleren/uORFomePipe documentation built on Jan. 14, 2024, 5:11 a.m.