Description Usage Arguments Examples
View source: R/DRAP_code_1.5.11.r
Visulize the result of drug response analysis, such as RR or DCR of each arm.
1 | plotDRResults(data, by, min.number, measurement = c('RR','DCR','both'), ...)
|
data |
drug response level ,the output of DRLevel. |
by |
the level summaried by. |
min.number |
the lower cutoff of sample number of every arm |
measurement |
the response evaluation indexes used, whether "RR", "DCR", or "both". |
... |
other parameters passed to ggplot |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 | # NPDXE.criteria
npdxe.criteria <- data.frame(BestResponse.lower = c(-1000,-0.95,-0.5,0.35),
BestResponse.upper = c(-0.95,-0.5,0.35,1000),
BestAvgResponse.lower = c(-1000,-0.4,-0.2,0.3),
BestAvgResponse.upper = c(-0.4,-0.2,0.3,1000),
Level = c( 'CR','PR', 'SD','PD'))
npdxe.criteria
data(TAN.volume.data)
TAN.drl <- DRLevel(data = TAN.volume.data,
method = 'NPDXE.Response',
criteria = npdxe.criteria,
neg.control = 'Control')
plotDRResults(TAN.drl,by = 'Arms',measurement = 'DCR',min.number = 5)
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