CellInter-class: The CellInter Class The CellInter object is the center of...

In ShellyCoder/cellcall: inference of intercellular networks from single-cell transcriptomics

The CellInter Class The CellInter object is the center of each cell-cell communication analysis with the scRNA-seq.

Description

The CellInter Class The CellInter object is the center of each cell-cell communication analysis with the scRNA-seq.

Slots

data

The normalized expression matrix, mean matrix, gsea result, lr score matrix, and lr score matrix(log-scale)

meta.data

cell type, barcode, nFeature and count of each cell

reductions

data.frame of L-R-TF with specific cellA-cellB, later for sankey plot

project

the name of this analysis

Org

the species of this scRNA-seq

version

the version of this R package

ShellyCoder/cellcall documentation built on Oct. 11, 2023, 2:50 p.m.