ridgeplot.DIY: plot ridge graph

In ShellyCoder/cellcall: inference of intercellular networks from single-cell transcriptomics

plot ridge graph

Description

plot ridge graph

Usage

ridgeplot.DIY(
  x,
  showCategory = targetTFindex,
  fill = "p.adjust",
  core_enrichment = TRUE,
  orderBy = "NES",
  decreasing = FALSE
)

Arguments

x	gseaResult object
showCategory	number of categories for plotting
fill	one of "pvalue", "p.adjust", "qvalue"
core_enrichment	whether only using core_enriched genes
orderBy	The order of the Y-axis, default is NES, other colnames is ok, eg: "ID", "Description", "setSize", "enrichmentScore", "p.adjust".
decreasing	logical. Should the orderBy order be increasing or decreasing?

ShellyCoder/cellcall documentation built on Oct. 11, 2023, 2:50 p.m.