counts2normalized_10X: transform count to CPM
In ShellyCoder/cellcall: inference of intercellular networks from single-cell transcriptomics
counts2normalized_10X R Documentation
transform count to CPM
Description
transform count to CPM
Usage
counts2normalized_10X(data, toType, scale.factor = 10^6)
Arguments
data
a dataframe with row of gene and column of sample
toType
whether RPKM or TPM of result you wanted, eg "CPM"
scale.factor
set the scale factor, default "10^6"
Value
the CPM of data
ShellyCoder/cellcall documentation built on Oct. 11, 2023, 2:50 p.m.
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| counts2normalized_10X | R Documentation |
transform count to CPM
Description
transform count to CPM
Usage
counts2normalized_10X(data, toType, scale.factor = 10^6)
Arguments
data |
a dataframe with row of gene and column of sample |
toType |
whether RPKM or TPM of result you wanted, eg "CPM" |
scale.factor |
set the scale factor, default "10^6" |
Value
the CPM of data
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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