tests/testthat/test-function_bias_binary.R
In Sterniii3/drugdevelopR: Utility-Based Optimal Phase II/III Drug Development Planning
test_that("Utility increases with smaller risk ratio", {
expect_lte(utility_binary_L(n2 = 50, RRgo = 0.8, Adj = 0.1, w = 0.3,
p0 = 0.6, p11 = 0.3, p12 = 0.5,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = TRUE)[1],
utility_binary_L(n2 = 50, RRgo = 0.8, Adj = 0.1, w = 0.3,
p0 = 0.8, p11 = 0.2, p12 = 0.4,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = TRUE)[1])
})
test_that("Utility increases with smaller risk ratio", {
expect_lte(utility_binary_L(n2 = 50, RRgo = 0.8, Adj = 0.1, w = 0.3,
p0 = 0.6, p11 = 0.3, p12 = 0.5,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = FALSE)[1],
utility_binary_L(n2 = 50, RRgo = 0.8, Adj = 0.1, w = 0.3,
p0 = 0.8, p11 = 0.2, p12 = 0.4,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = FALSE)[1])
})
test_that("Utility increases with smaller risk ratio", {
expect_lte(utility_binary_R(n2 = 50, RRgo = 0.8, Adj = 0.8, w = 0.3,
p0 = 0.6, p11 = 0.3, p12 = 0.5,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = TRUE)[1],
utility_binary_R(n2 = 50, RRgo = 0.8, Adj = 0.8, w = 0.3,
p0 = 0.8, p11 = 0.2, p12 = 0.4,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = TRUE)[1])
})
test_that("Utility increases with smaller risk ratio", {
expect_lte(utility_binary_R(n2 = 50, RRgo = 0.8, Adj = 0.8, w = 0.3,
p0 = 0.6, p11 = 0.3, p12 = 0.5,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = FALSE)[1],
utility_binary_R(n2 = 50, RRgo = 0.8, Adj = 0.8, w = 0.3,
p0 = 0.8, p11 = 0.2, p12 = 0.4,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = FALSE)[1])
})
test_that("Utility increases with smaller risk ratio", {
expect_lte(utility_binary_L2(n2 = 50, RRgo = 0.8, Adj = 0.1, w = 0.3,
p0 = 0.6, p11 = 0.3, p12 = 0.5,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = TRUE)[1],
utility_binary_L2(n2 = 50, RRgo = 0.8, Adj = 0.1, w = 0.3,
p0 = 0.8, p11 = 0.2, p12 = 0.4,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = TRUE)[1])
})
test_that("Utility increases with smaller risk ratio", {
expect_lte(utility_binary_L2(n2 = 50, RRgo = 0.8, Adj = 0.1, w = 0.3,
p0 = 0.6, p11 = 0.3, p12 = 0.5,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = FALSE)[1],
utility_binary_L2(n2 = 50, RRgo = 0.8, Adj = 0.1, w = 0.3,
p0 = 0.8, p11 = 0.2, p12 = 0.4,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = FALSE)[1])
})
test_that("Utility increases with smaller risk ratio", {
expect_lte(utility_binary_R2(n2 = 50, RRgo = 0.8, Adj = 0.8, w = 0.3,
p0 = 0.6, p11 = 0.3, p12 = 0.5,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = TRUE)[1],
utility_binary_R2(n2 = 50, RRgo = 0.8, Adj = 0.8, w = 0.3,
p0 = 0.8, p11 = 0.2, p12 = 0.4,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = TRUE)[1])
})
test_that("Utility increases with smaller risk ratio", {
expect_lte(utility_binary_R2(n2 = 50, RRgo = 0.8, Adj = 0.8, w = 0.3,
p0 = 0.6, p11 = 0.3, p12 = 0.5,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = FALSE)[1],
utility_binary_R2(n2 = 50, RRgo = 0.8, Adj = 0.8, w = 0.3,
p0 = 0.8, p11 = 0.2, p12 = 0.4,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = FALSE)[1])
})
Sterniii3/drugdevelopR documentation built on Jan. 26, 2024, 6:17 a.m.
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test_that("Utility increases with smaller risk ratio", {
expect_lte(utility_binary_L(n2 = 50, RRgo = 0.8, Adj = 0.1, w = 0.3,
p0 = 0.6, p11 = 0.3, p12 = 0.5,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = TRUE)[1],
utility_binary_L(n2 = 50, RRgo = 0.8, Adj = 0.1, w = 0.3,
p0 = 0.8, p11 = 0.2, p12 = 0.4,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = TRUE)[1])
})
test_that("Utility increases with smaller risk ratio", {
expect_lte(utility_binary_L(n2 = 50, RRgo = 0.8, Adj = 0.1, w = 0.3,
p0 = 0.6, p11 = 0.3, p12 = 0.5,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = FALSE)[1],
utility_binary_L(n2 = 50, RRgo = 0.8, Adj = 0.1, w = 0.3,
p0 = 0.8, p11 = 0.2, p12 = 0.4,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = FALSE)[1])
})
test_that("Utility increases with smaller risk ratio", {
expect_lte(utility_binary_R(n2 = 50, RRgo = 0.8, Adj = 0.8, w = 0.3,
p0 = 0.6, p11 = 0.3, p12 = 0.5,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = TRUE)[1],
utility_binary_R(n2 = 50, RRgo = 0.8, Adj = 0.8, w = 0.3,
p0 = 0.8, p11 = 0.2, p12 = 0.4,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = TRUE)[1])
})
test_that("Utility increases with smaller risk ratio", {
expect_lte(utility_binary_R(n2 = 50, RRgo = 0.8, Adj = 0.8, w = 0.3,
p0 = 0.6, p11 = 0.3, p12 = 0.5,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = FALSE)[1],
utility_binary_R(n2 = 50, RRgo = 0.8, Adj = 0.8, w = 0.3,
p0 = 0.8, p11 = 0.2, p12 = 0.4,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = FALSE)[1])
})
test_that("Utility increases with smaller risk ratio", {
expect_lte(utility_binary_L2(n2 = 50, RRgo = 0.8, Adj = 0.1, w = 0.3,
p0 = 0.6, p11 = 0.3, p12 = 0.5,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = TRUE)[1],
utility_binary_L2(n2 = 50, RRgo = 0.8, Adj = 0.1, w = 0.3,
p0 = 0.8, p11 = 0.2, p12 = 0.4,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = TRUE)[1])
})
test_that("Utility increases with smaller risk ratio", {
expect_lte(utility_binary_L2(n2 = 50, RRgo = 0.8, Adj = 0.1, w = 0.3,
p0 = 0.6, p11 = 0.3, p12 = 0.5,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = FALSE)[1],
utility_binary_L2(n2 = 50, RRgo = 0.8, Adj = 0.1, w = 0.3,
p0 = 0.8, p11 = 0.2, p12 = 0.4,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = FALSE)[1])
})
test_that("Utility increases with smaller risk ratio", {
expect_lte(utility_binary_R2(n2 = 50, RRgo = 0.8, Adj = 0.8, w = 0.3,
p0 = 0.6, p11 = 0.3, p12 = 0.5,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = TRUE)[1],
utility_binary_R2(n2 = 50, RRgo = 0.8, Adj = 0.8, w = 0.3,
p0 = 0.8, p11 = 0.2, p12 = 0.4,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = TRUE)[1])
})
test_that("Utility increases with smaller risk ratio", {
expect_lte(utility_binary_R2(n2 = 50, RRgo = 0.8, Adj = 0.8, w = 0.3,
p0 = 0.6, p11 = 0.3, p12 = 0.5,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = FALSE)[1],
utility_binary_R2(n2 = 50, RRgo = 0.8, Adj = 0.8, w = 0.3,
p0 = 0.8, p11 = 0.2, p12 = 0.4,
in1 = 300, in2 = 600, alpha = 0.025, beta = 0.1,
c2 = 0.75, c3 = 1, c02 = 100, c03 = 150,
K = Inf, N = Inf, S = -Inf,
steps1 = 1, stepm1 = 0.95, stepl1 = 0.85,
b1 = 1000, b2 = 2000, b3 = 3000,fixed = FALSE)[1])
})
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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