README.md

In TYMichaelsen/mmtravis: Tools for analysing (meta)transcriptomics data

Tools for metatranscriptome analysis

mmtravis is an R-package to conveniently visualise and analyse NGS transcriptomics data in different ways. NOTE: This is still in development, so don't expect everything to be working perfectly - yet!

Installing mmtravis

First, install R (3.4.1 or later) and RStudio. Windows users should also install RTools. Then open RStudio as administrator (!) and run the commands below to install mmtravis from the console:

install.packages("remotes")
remotes::install_github("TYMichaelsen/mmtravis")

Get started

Keep an eye out for a get started page, Comming soon! For now, go to the References page to see a list of available functions.

Blog posts about mmtravis

Keep an eye out for upcomming blogposts at http://albertsenlab.org/ about mmtravis

Releases

To install a specific (older) release of mmtravis use "@release" as suffix, fx remotes::install_github("TYMichaelsen/mmtravis@1.0") to install the first release (1.0) of mmtravis. The latest stable release can be installed with remotes::install_github("TYMichaelsen/mmtravis@*release").

TYMichaelsen/mmtravis documentation built on Aug. 5, 2019, 10:48 a.m.