mt_loadMetaT: Load data produced by the MetaT pipeline into R.
In TYMichaelsen/mmtravis: Tools for analysing (meta)transcriptomics data
Description
Usage
Arguments
Details
Value
Author(s)
Description
mt_loadMetaT
Usage
1
mt_loadMetaT(counts.txt,seqstat.txt,mtmeta = NULL)
Arguments
counts.txt
(required) The count table as outputted from the MetaT pipeline
seqstat.txt
(required) The seqstat table as outputted from the MetaT pipeline
mtmeta
(optional) data.frame with metadata associated to samples (columns). See mt_load for details.
Details
This function is a wrapper to transform .txt files outputted from the MetaT pipeline into R.
Value
A mmt object.
Author(s)
Thomas Yssing Michaelsen tym@bio.aau.dk
TYMichaelsen/mmtravis documentation built on Aug. 5, 2019, 10:48 a.m.
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Description Usage Arguments Details Value Author(s)
Description
mt_loadMetaT
Usage
1 | mt_loadMetaT(counts.txt,seqstat.txt,mtmeta = NULL)
|
Arguments
counts.txt |
(required) The count table as outputted from the MetaT pipeline |
seqstat.txt |
(required) The seqstat table as outputted from the MetaT pipeline |
mtmeta |
(optional) data.frame with metadata associated to samples (columns). See |
Details
This function is a wrapper to transform .txt files outputted from the MetaT pipeline into R.
Value
A mmt object.
Author(s)
Thomas Yssing Michaelsen tym@bio.aau.dk
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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