mt_gather: Gather the mmt object into one dataframe, suitable for e.g....

In TYMichaelsen/mmtravis: Tools for analysing (meta)transcriptomics data

Description

Gather the mmt object into one dataframe, suitable for e.g. ggplot or custom analysis (internal function)

Usage

mt_gather(mmt, metavars = c("SampleID", "GeneID"))

Arguments

mmt	(required) Data list as loaded with mt_load.
metavars	(optional) Columns from mtgene/mtmeta to keep. (default: NULL (all columns))

Value

A data.table in long format. The gene count/expression is stored in the Exprs column.

Author(s)

Thomas Yssing Michaelsen [e-mail]

TYMichaelsen/mmtravis documentation built on Aug. 5, 2019, 10:48 a.m.