API for Terkild/scutility
Utility Functions For Multi-modal Single-cell Analysis
| Global functions | |
|---|---|
| annotate_SingleR | Man page Source code |
| annotate_hierarchy | Man page Source code |
| annotate_hierarchy_MonacoImmuneData | Man page Source code |
| annotate_merge_by_cluster | Man page Source code |
| barcode_rank | Man page Source code |
| cell_id_hash | Man page Source code |
| color_parentcluster | Man page Source code |
| color_subcluster | Man page Source code |
| colors_get_distinct | Man page Source code |
| cutoff_set | Man page Source code |
| dimred_encircle | Man page Source code |
| dimred_encircle_add | Man page Source code |
| dimred_encircle_groups | Man page Source code |
| dimred_labels_add | Man page Source code |
| droplet_barcodes_debris | Man page Source code |
| droplet_counts_per_compartment | Man page |
| ggplot_set_theme | Man page Source code |
| modalities_load_cellranger_count | Man page Source code |
| modalities_load_kallisto | Man page Source code |
| mtx_balance | Man page Source code |
| mtx_balance_matrix | Man page Source code |
| mtx_load_long | Man page Source code |
| mtx_long_save | Man page Source code |
| plot_alluvial | Man page Source code |
| plot_barcode_rank | Man page Source code |
| plot_connected_barplot | Man page Source code |
| plot_dimred | Man page Source code |
| plot_dots | Man page Source code |
| plot_quadrants | Man page Source code |
| read_kallisto_data | Man page Source code |
| scVI_load | Man page Source code |
| seurat_annotate_SingleR | Man page Source code |
| seurat_dimred_cluster_labels | Man page Source code |
| seurat_dimred_encircle_add | Man page Source code |
| seurat_dimred_labels_add | Man page Source code |
| seurat_plot_alluvial | Man page Source code |
| seurat_plot_connected_barplot | Man page Source code |
| seurat_plot_dimred_counts | Man page Source code |
| subcluster_number | Man page Source code |
| subset_matrix | Man page Source code |
| totalVI_load | Man page Source code |
| translate_ensg_to_symbol | Man page Source code |
