modalities_load_kallisto: Load Kallisto data by modality

In Terkild/scutility: Utility Functions For Multi-modal Single-cell Analysis

Load Kallisto data by modality

Description

Load Kallisto data by modality

Usage

modalities_load_kallisto(
  paths,
  modalities = c("ADT", "HTO"),
  barcode_suffix = "",
  folder = "counts_unfiltered",
  ...
)

Arguments

paths	Paths to kallisto output folders
modalities	Vector of modalities to be loaded from kallisto output
barcode_suffix	Suffix added to the end of each cell barcode name (to make it compatible with Cell Ranger output)
folder	Folder containing count matrix

Value

list of modality count matrices

Terkild/scutility documentation built on Jan. 16, 2025, 5:28 p.m.