seurat_dimred_labels_add: Add labels to DimPlot with annotation from seurat object

In Terkild/scutility: Utility Functions For Multi-modal Single-cell Analysis

Add labels to DimPlot with annotation from seurat object

Description

Wrapper function for calling seurat_dimred_cluster_labels and dimred_labels_add

Usage

seurat_dimred_labels_add(
  object,
  reduction = NULL,
  dims = c(1, 2),
  group.by = "ident",
  FUN = median,
  ...
)

Arguments

object	Seurat object
reduction	Label of reduction object to use (uses the last created reduction by default)
dims	Which dimensions should be used?
group.by	Meta data column to label clusters
FUN	Function called on reduced dimensions to calculate label position
...	Passed on to scutility::dimred_labels_add

Value

list of ggplot2 functions to be added to an existing plot

Terkild/scutility documentation built on Jan. 16, 2025, 5:28 p.m.