color_subcluster: Expand color vector for subclusters

In Terkild/scutility: Utility Functions For Multi-modal Single-cell Analysis

Expand color vector for subclusters

Description

Make a vector of colors for a vector of subclusters grouped by their assignment to a cluster

Usage

color_subcluster(
  subcluster,
  cluster,
  cluster_colors = c(),
  order = TRUE,
  brightness_change = NA,
  max_change = 1
)

Arguments

subcluster	vector of subcluster assignments (can be duplicated across cell assignments)
cluster	vector of cluster assignment for each subcluster (vector of same length as subcluster)
cluster_colors	(named) vector of colors for each cluster
order	should colors be ordered by subcluster size? Set to FALSE to use factor levels
brightness_change	how big a change in color brightness should be applied at each step (between 0 and 1)

Value

vector of colors

Terkild/scutility documentation built on Jan. 16, 2025, 5:28 p.m.