get_gr_from_table: Get GRanges from chr/start/end table
In Townsend-Lab-Yale/cancereffectsizeR: Calculate Cancer Effect Size
get_gr_from_table R Documentation
Get GRanges from chr/start/end table
Description
Mainly built for select_variants() output, and uses the
center_nt_pos on AACs (rather than all from start-end). Assumes
MAF-like coordinates (1-based, closed).
Usage
get_gr_from_table(variant_table)
Arguments
variant_table
data.table
Townsend-Lab-Yale/cancereffectsizeR documentation built on April 28, 2024, 6:14 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| get_gr_from_table | R Documentation |
Get GRanges from chr/start/end table
Description
Mainly built for select_variants() output, and uses the center_nt_pos on AACs (rather than all from start-end). Assumes MAF-like coordinates (1-based, closed).
Usage
get_gr_from_table(variant_table)
Arguments
variant_table |
data.table |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.