Files in Townsend-Lab-Yale/cancereffectsizeR
Calculate Cancer Effect Size

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/DNP_TNP_remover.R R/effect_size_calculation.R R/hg_converter.R R/merging_NCI_and_local_MAF_files.R R/selection_intensity_calc_function.R R/trinuc_profile_function_with_weights.R R/tumor_allele_adder.R R/unique_tumor_addition.R R/wrongRef_dndscv_checker.R README.md
data/AA_translations.RData
data/RefCDS_TP53splice.RData
data/bladder_pca.RData
data/breast_pca.RData
data/cesc_pca.RData
data/colon_pca.RData
data/esca_pca.RData
data/gbm_pca.RData
data/hnsc_pca.RData
data/kirc_pca.RData
data/lgg_pca.RData
data/lihc_pca.RData
data/lung_pca.RData
data/lymphoma_pca.RData
data/ov_pca.RData
data/pancreas_pca.RData
data/prad_pca.RData
data/rectum_pca.RData
data/skcm_pca.RData
data/stomach_pca.RData
data/thca_pca.RData
data/ucec_pca.RData
man/DNP_TNP_remover.Rd man/effect_size_SNV.Rd man/hg_converter.Rd man/merging_TCGA_and_local_MAFdata_function.Rd man/selection_intensity_calculation.Rd man/trinuc_profile_function_with_weights.Rd man/tumor_allele_adder.Rd man/unique_tumor_addition_function.Rd man/wrongRef_dndscv_checker.Rd user_guide/cancereffectsizeR_user_guide.Rmd user_guide/cancereffectsizeR_user_guide.md
vignettes/.gitignore
vignettes/cancereffectsizer-vignette.Rmd
Townsend-Lab-Yale/cancereffectsizeR documentation built on Nov. 17, 2018, 7:23 p.m.