samples_with: Find samples with specified variants
In Townsend-Lab-Yale/cancereffectsizeR: Calculate Cancer Effect Size
View source: R/select_samples.R
samples_with R Documentation
Find samples with specified variants
Description
A convenience function to identify samples with specific variants.
Usage
samples_with(cesa, any_of = NULL)
Arguments
cesa
CESAnalysis
any_of
Select samples with ANY of the given variant names/IDs, such as
c("8:142506482_C>G", "KRAS G12C"). When a gene has multiple transcripts in reference
data, you may wish to use full IDs, such as "KRAS_G12C_ENSP00000256078".
Townsend-Lab-Yale/cancereffectsizeR documentation built on April 28, 2024, 6:14 p.m.
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View source: R/select_samples.R
| samples_with | R Documentation |
Find samples with specified variants
Description
A convenience function to identify samples with specific variants.
Usage
samples_with(cesa, any_of = NULL)
Arguments
cesa |
CESAnalysis |
any_of |
Select samples with ANY of the given variant names/IDs, such as c("8:142506482_C>G", "KRAS G12C"). When a gene has multiple transcripts in reference data, you may wish to use full IDs, such as "KRAS_G12C_ENSP00000256078". |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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