sswm_lik: sswm_lik

In Townsend-Lab-Yale/cancereffectsizeR: Calculate Cancer Effect Size

sswm_lik

Description

Generates log-likelihood function of site-level selection with "strong selection, weak mutation" assumption. All arguments to this likelihood function factory are automatically supplied by ces_variant().

Usage

sswm_lik(rates_tumors_with, rates_tumors_without)

Arguments

rates_tumors_with	vector of site-specific mutation rates for all tumors with variant
rates_tumors_without	vector of site-specific mutation rates for all eligible tumors without variant

Townsend-Lab-Yale/cancereffectsizeR documentation built on Feb. 15, 2025, 10:23 a.m.