read_vcf: Internal VCF parser
In Townsend-Lab-Yale/cancereffectsizeR: Calculate Cancer Effect Size
View source: R/vcf_to_maf_table.R
read_vcf R Documentation
Internal VCF parser
Description
Used by vcfs_to_maf_table()
Usage
read_vcf(vcf, sample_id, vcf_name = sample_id)
Arguments
vcf
VCF filename or VCF-like data.table.
sample_id
1-length sample identifier.
vcf_name
1-length identifier used in some user messages.
Value
MAF-like data.table
Townsend-Lab-Yale/cancereffectsizeR documentation built on June 12, 2025, 8:49 a.m.
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View source: R/vcf_to_maf_table.R
| read_vcf | R Documentation |
Internal VCF parser
Description
Used by vcfs_to_maf_table()
Usage
read_vcf(vcf, sample_id, vcf_name = sample_id)
Arguments
vcf |
VCF filename or VCF-like data.table. |
sample_id |
1-length sample identifier. |
vcf_name |
1-length identifier used in some user messages. |
Value
MAF-like data.table
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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