documentErrorRegions: Identification of Errors

In USCDTG/tLOH: Assessment of evidence for LOH in spatial transcriptomics pre-processed data using Bayes factor calculations

Identification of Errors

Description

Generates dataframes equal to the length of original data containing NA if errors were found during the run HMM process. Important for final overview of results

Usage

documentErrorRegions(a,b)

Arguments

a	List of dataframes from prepareHMMdataframes
b	List of HMM state determination dataframes from the run_HMM series of functions

Value

Output is a list of dataframes to be used by the regionAnalysis function

Author(s)

Michelle Webb

Examples

estimatedStates <- data.frame(state = c(1,1,1), S1 = c(1,1,1), S2 = c(1,1,1))
sampleDataFrame <- data.frame(data = c(1,1,1))
list1 <- list(sampleDataFrame,sampleDataFrame)
list2 <- list(estimatedStates,estimatedStates)
documentErrorRegions(list1,list2)

USCDTG/tLOH documentation built on Oct. 23, 2022, 8:05 p.m.