marginalM1Calc: Calculate marginal of Model 1
In USCDTG/tLOH: Assessment of evidence for LOH in spatial transcriptomics pre-processed data using Bayes factor calculations
marginalM1Calc R Documentation
Calculate marginal of Model 1
Description
This function takes the number of counts for a reference allele as x,
and the number of total allele counts as y.
Arguments
x
Number of counts for the reference allele.
y
Number of counts total at this SNP position.
Details
The reference and total counts should come from a .csv output by the spatial
LOH pre-processing pipeline.
Value
The value returned from marginalM1Calc is numeric
Author(s)
Michelle Webb
Examples
marginalM1Calc(10, 0.5)
USCDTG/tLOH documentation built on Oct. 23, 2022, 8:05 p.m.
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| marginalM1Calc | R Documentation |
Calculate marginal of Model 1
Description
This function takes the number of counts for a reference allele as x, and the number of total allele counts as y.
Arguments
x |
Number of counts for the reference allele. |
y |
Number of counts total at this SNP position. |
Details
The reference and total counts should come from a .csv output by the spatial LOH pre-processing pipeline.
Value
The value returned from marginalM1Calc is numeric
Author(s)
Michelle Webb
Examples
marginalM1Calc(10, 0.5)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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