fqcVersion: Get the FASTQC version

Description Usage Arguments Value Examples

Description

Get the FASTQC version used to generate the intial files

Usage

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## S4 method for signature 'FastqcData'
fqcVersion(object)

## S4 method for signature 'FastqcDataList'
fqcVersion(object)

## S4 method for signature 'ANY'
fqcVersion(object)

Arguments

object

An object of class FastqcData or FastqcDataList

Value

A character vector (FastqcData), or tibble (FastqcDataList)

Examples

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# Get the files included with the package
packageDir <- system.file("extdata", package = "ngsReports")
fl <- list.files(packageDir, pattern = "fastqc.zip", full.names = TRUE)

# Load the FASTQC data as a FastqcDataList object
fdl <- FastqcDataList(fl)

# Get the FASTQC version
fqcVersion(fdl)

UofABioinformaticsHub/fastqcReports documentation built on Nov. 21, 2020, 7:44 p.m.