UofABioinformaticsHub/fastqcReports: Load FastqQC reports and other NGS related files

This package provides methods and object classes for parsing FastQC reports and output summaries from other NGS tools into R. As well as parsing files, multiple plotting methods have been implemented for visualising the parsed data. Plots can be generated as static ggplot objects or interactive plotly objects.

Getting started

Package details

Bioconductor views QualityControl ReportWriting
Licensefile LICENSE
URL https://github.com/steveped/ngsReports
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
UofABioinformaticsHub/fastqcReports documentation built on June 2, 2022, 3:02 a.m.