A.design.plot: Plot number of reads in each sample for each grouping factor.
In UvA-MAD/faradr: Tools for sequencing data analysis.
Description
Usage
Arguments
Value
Description
Bar plots representing number of reads in each sample.
There is one bar plot per grouping factor.
Samples are grouped and clored by grouping factor.
Grouping factors are extracted from design table.
Samples are expected to be separate fastq files.
Usage
1
A.design.plot(fqc, design.table)
Arguments
fqc
FastQA from package ShortRead
design.table
data.frame holds information about experimantal design
Value
list of plot objects
UvA-MAD/faradr documentation built on May 9, 2019, 9:41 p.m.
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Description Usage Arguments Value
Description
Bar plots representing number of reads in each sample. There is one bar plot per grouping factor. Samples are grouped and clored by grouping factor. Grouping factors are extracted from design table. Samples are expected to be separate fastq files.
Usage
1 | A.design.plot(fqc, design.table)
|
Arguments
fqc |
FastQA from package ShortRead |
design.table |
data.frame holds information about experimantal design |
Value
list of plot objects
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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