C3plot: Plot fraction of reads with partucular quality or higher per...
In UvA-MAD/faradr: Tools for sequencing data analysis.
Description
Usage
Arguments
Value
Description
4 line plots, for qualities 18, 20, 24 and 28, showing fraction
of reads with one of those qualities per position in the read.
One line per sample.
Samples are explected to be separage fastq files.
Usage
1
C3plot(fqc, samples)
Arguments
fqc
FastQA from package ShortRead
samples
ShortReadQ object from package ShortRead
Value
plot object
UvA-MAD/faradr documentation built on May 9, 2019, 9:41 p.m.
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Description Usage Arguments Value
Description
4 line plots, for qualities 18, 20, 24 and 28, showing fraction of reads with one of those qualities per position in the read. One line per sample. Samples are explected to be separage fastq files.
Usage
1 | C3plot(fqc, samples)
|
Arguments
fqc |
FastQA from package ShortRead |
samples |
ShortReadQ object from package ShortRead |
Value
plot object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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