B2.design.plot: Plot fraction of reads with particular lengh or longer.
In UvA-MAD/faradr: Tools for sequencing data analysis.
Description
Usage
Arguments
Value
Description
Line plot showing fraction of reads on y axis
and minimal read length on x axis.
One line per sample.
There is one plot per grouping factor.
Samples clored by grouping factor.
Grouping factors are extracted from design.table.
Samples are explected to be separage fastq files.
Usage
1
B2.design.plot(samples, design.table)
Arguments
samples
ShortReadQ object from package ShortRead
design.table
data.frame holds information about experimantal design
Value
plots list of plot objects
UvA-MAD/faradr documentation built on May 9, 2019, 9:41 p.m.
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Description Usage Arguments Value
Description
Line plot showing fraction of reads on y axis and minimal read length on x axis. One line per sample. There is one plot per grouping factor. Samples clored by grouping factor. Grouping factors are extracted from design.table. Samples are explected to be separage fastq files.
Usage
1 | B2.design.plot(samples, design.table)
|
Arguments
samples |
ShortReadQ object from package ShortRead |
design.table |
data.frame holds information about experimantal design |
Value
plots list of plot objects
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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