build_coassignment_prob_matrix_densities: Build a coassignment probability matrix using SNV specific...
In Wedge-Oxford/dpclust: DPClust - An R package for subclonal reconstruction of tumours using sequencing data
build_coassignment_prob_matrix_densities R Documentation
Build a coassignment probability matrix using SNV specific densities over
the assigned CCFs during MCMC
Description
Build a coassignment probability matrix using SNV specific densities over
the assigned CCFs during MCMC
Usage
build_coassignment_prob_matrix_densities(S.i, pi.h, no.iters.burn.in)
Arguments
S.i
The mutation assignments to cluster ids
pi.h
The cluster CCFs
no.iters.burn.in
The number of iterations to discard as burn in
Value
Square matrix with a row and column for every mutation, each cell contains the probability of the pair of mutations belonging to the same cluster
Author(s)
dw9, sd11
Wedge-Oxford/dpclust documentation built on July 6, 2024, 2:02 p.m.
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| build_coassignment_prob_matrix_densities | R Documentation |
Build a coassignment probability matrix using SNV specific densities over the assigned CCFs during MCMC
Description
Build a coassignment probability matrix using SNV specific densities over the assigned CCFs during MCMC
Usage
build_coassignment_prob_matrix_densities(S.i, pi.h, no.iters.burn.in)
Arguments
S.i |
The mutation assignments to cluster ids |
pi.h |
The cluster CCFs |
no.iters.burn.in |
The number of iterations to discard as burn in |
Value
Square matrix with a row and column for every mutation, each cell contains the probability of the pair of mutations belonging to the same cluster
Author(s)
dw9, sd11
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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