make_sample_params: Helper function to package sample parameters
In Wedge-Oxford/dpclust: DPClust - An R package for subclonal reconstruction of tumours using sequencing data
View source: R/DirichletProcessClustering.R
make_sample_params R Documentation
Helper function to package sample parameters
Description
Helper function to package sample parameters
Usage
make_sample_params(datafiles, cellularity, is.male, samplename, subsamples,
mutphasingfiles = NULL)
Arguments
datafiles
Vector of data files to be read in
cellularity
Vector with purity for all samples
is.male
Boolean whether the sample is male
samplename
Donorname, used in plots and to name output files
subsamples
Samplenames, used for multi-dimensional clustering to denote individual samples (this information is thought of as a suffix to the samplename, so: samplename=PD4120 and subsamplename=c(a, c)
Value
A list containing these components
Author(s)
sd11
Wedge-Oxford/dpclust documentation built on July 6, 2024, 2:02 p.m.
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View source: R/DirichletProcessClustering.R
| make_sample_params | R Documentation |
Helper function to package sample parameters
Description
Helper function to package sample parameters
Usage
make_sample_params(datafiles, cellularity, is.male, samplename, subsamples,
mutphasingfiles = NULL)
Arguments
datafiles |
Vector of data files to be read in |
cellularity |
Vector with purity for all samples |
is.male |
Boolean whether the sample is male |
samplename |
Donorname, used in plots and to name output files |
subsamples |
Samplenames, used for multi-dimensional clustering to denote individual samples (this information is thought of as a suffix to the samplename, so: samplename=PD4120 and subsamplename=c(a, c) |
Value
A list containing these components
Author(s)
sd11
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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