get.conflicting.indices: Returns a list of subclonal SNV indices that are conflicting...
In Wedge-Oxford/dpclust: DPClust - An R package for subclonal reconstruction of tumours using sequencing data
get.conflicting.indices R Documentation
Returns a list of subclonal SNV indices that are conflicting with a CNA event. This code
classifies a subclonal SNV has a CCF of < 0.9. This function returns a vector consisting of T/F values.
TODO: Determine whether an SNV is likely to be subclonal in a less arbitrary way.
Description
Returns a list of subclonal SNV indices that are conflicting with a CNA event. This code
classifies a subclonal SNV has a CCF of < 0.9. This function returns a vector consisting of T/F values.
TODO: Determine whether an SNV is likely to be subclonal in a less arbitrary way.
Usage
get.conflicting.indices(dataset, cndata)
Wedge-Oxford/dpclust documentation built on July 6, 2024, 2:02 p.m.
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| get.conflicting.indices | R Documentation |
Returns a list of subclonal SNV indices that are conflicting with a CNA event. This code classifies a subclonal SNV has a CCF of < 0.9. This function returns a vector consisting of T/F values. TODO: Determine whether an SNV is likely to be subclonal in a less arbitrary way.
Description
Returns a list of subclonal SNV indices that are conflicting with a CNA event. This code classifies a subclonal SNV has a CCF of < 0.9. This function returns a vector consisting of T/F values. TODO: Determine whether an SNV is likely to be subclonal in a less arbitrary way.
Usage
get.conflicting.indices(dataset, cndata)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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