plotAssignmentTable: Plot a table with the assignment counts

In Wedge-Oxford/dpclust: DPClust - An R package for subclonal reconstruction of tumours using sequencing data

Plot a table with the assignment counts

Description

Plot a table with the assignment counts

Usage

plotAssignmentTable(cluster_locations, pngFile, cndata = NULL,
  num_samples = 1, indeldata = NULL)

Arguments

cluster_locations	Cluster table with cluster number, cluster location and number of mutations as columns.
pngFile	Output file to save the image.
cndata	Optional CNA data table. This must be the table from after assigning CNA events to clusters (Default: NULL).
num_samples	Optional parameter representing the number of samples that have been clustered (Default: 1)
indeldata	Optional indel data table. This must be the table from after assigning indel events to clusters (Default: NULL).

Author(s)

sd11

Wedge-Oxford/dpclust documentation built on July 6, 2024, 2:02 p.m.