MVP.Data.impute: MVP.Data.impute: To impute the missing genotype Author:...

In XiaoleiLiuBio/MVP: Memory-Efficient, Visualize-Enhanced, Parallel-Accelerated GWAS Tool

MVP.Data.impute: To impute the missing genotype Author: Haohao Zhang Build date: Sep 12, 2018

Description

MVP.Data.impute: To impute the missing genotype Author: Haohao Zhang Build date: Sep 12, 2018

Usage

MVP.Data.impute(
  mvp_prefix,
  out = NULL,
  method = "Major",
  ncpus = NULL,
  verbose = TRUE
)

Arguments

mvp_prefix	the prefix of mvp file
out	the prefix of output file
method	'Major', 'Minor', "Middle"
ncpus	number of threads for imputing
verbose	whether to print the reminder

Value

NULL Output files: imputed genotype file

Examples

mvpPath <- file.path(system.file("extdata", "05_mvp", package = "rMVP"), "mvp")

MVP.Data.impute(mvpPath, tempfile("outfile"), ncpus=1)

XiaoleiLiuBio/MVP documentation built on Sept. 27, 2024, 7:44 a.m.