Files in XiaoleiLiuBio/MVP
A Memory-efficient, Visualization-enhanced, and Parallel-accelerated Tool For GWAS

DESCRIPTION
NAMESPACE
R/MVP.Data.r R/MVP.EMMA.Vg.Ve.r R/MVP.FaSTLMM.LL.r R/MVP.FarmCPU.r R/MVP.GEMMA.Vg.Ve.r R/MVP.GLM.r R/MVP.K.VanRaden.r R/MVP.MLM.r R/MVP.PCA.r R/MVP.Report.r R/MVP.Version.r R/MVP.r README.md
data/cattle50K.rda
data/pig60K.rda
demo.data/VCF/myVCF.vcf
demo.data/VCF/test
demo.data/bed/plink.bed
demo.data/bed/plink.bim
demo.data/bed/plink.fam
demo.data/hapmap/hapmap.txt
demo.data/hapmap/phenotype.txt
demo.data/hapmap_multi_files/hmp.chr1.txt
demo.data/hapmap_multi_files/hmp.chr10.txt
demo.data/hapmap_multi_files/hmp.chr2.txt
demo.data/hapmap_multi_files/hmp.chr3.txt
demo.data/hapmap_multi_files/hmp.chr4.txt
demo.data/hapmap_multi_files/hmp.chr5.txt
demo.data/hapmap_multi_files/hmp.chr6.txt
demo.data/hapmap_multi_files/hmp.chr7.txt
demo.data/hapmap_multi_files/hmp.chr8.txt
demo.data/hapmap_multi_files/hmp.chr9.txt
demo.data/hapmap_multi_files/phenotype.txt
demo.data/kinship/MVP.kin.bin
demo.data/kinship/MVP.kin.desc
demo.data/mvp/mvp.geno.bin
demo.data/mvp/mvp.geno.desc
demo.data/mvp/mvp.map
demo.data/mvp/mvp.phe
demo.data/numeric/mvp.hmp.Numeric.txt
demo.data/numeric/mvp.hmp.map.txt
demo.data/numeric/mvp.hmp.phe
demo.data/pc/MVP.pc.bin
demo.data/pc/MVP.pc.desc
man/MVP-package.Rd man/MVP.Data.Rd man/MVP.EMMA.Vg.Ve.Rd man/MVP.FaSTLMM.LL.Rd man/MVP.FarmCPU.Rd man/MVP.GEMMA.Vg.Ve.Rd man/MVP.GLM.Rd man/MVP.K.VanRaden.Rd man/MVP.MLM.Rd man/MVP.Numericalization.Rd man/MVP.PCA.Rd man/MVP.Report.Rd man/MVP.Version.Rd man/cattle50K.Rd man/pig60K.Rd
results/1.jpg
results/10.jpg
results/11.jpg
results/2.jpg
results/2_2.jpg
results/3.jpg
results/4.jpg
results/5.jpg
results/6.jpg
results/7.jpg
results/8.jpg
results/9.jpg
results/MVP.PCA.jpg
results/MVP.PCA_2D.jpg
results/MVP.Phe_Distribution.Flower time.jpg
results/MVP.QQplot.trait.FarmCPU.jpg
results/MVP.QQplot.trait.GLM.jpg
results/MVP.QQplot.trait.MLM.jpg
results/MVP.Rectangular.Manhattan.trait.FarmCPU.jpg
results/MVP.Rectangular.Manhattan.trait.GLM.jpg
results/MVP.Rectangular.Manhattan.trait.MLM.jpg
results/MVP.SNP_Density.trait.GLM.trait.MLM.trait.FarmCPU.jpg
results/MVP.trait.FarmCPU.csv
results/MVP.trait.GLM.csv
results/MVP.trait.MLM.csv
results/Multi_Rectangular-Manhattan.trait.GLM.trait.MLM.trait.FarmCPU.jpg
results/QQplot.trait3.jpg
results/Rectangular-Manhattan.Fat percentage.jpg
results/Rectangular-Manhattan.trait3.jpg
results/illumilla_60K.jpg
results/mvp_logo.png
XiaoleiLiuBio/MVP documentation built on June 14, 2018, 1:42 a.m.