checkDistanceAllReadPair: Check distance requirment on all read pair appeared in...
In Yin1012/BreakViz: R Package Template
Description
Usage
Arguments
Value
Examples
Description
Check distance requirment on all read pair appeared in prePair list
Usage
1
checkDistanceAllReadPair(prePair, maxDistance)
Arguments
prePair
read pairs met before quirments
maxDistance
The distance requirment
Value
A list with possible read pairs
Examples
1
2
3
dupFiltedBedFile2 <- readRDS(system.file('extdata', 'dupFiltedBedFile2.Rda', package = 'BreakViz'))
prePair <- combineSameRead(bedFile2, dupFiltedBedFile2)
checkDistanceAllReadPair(prePair, maxDistance)
Yin1012/BreakViz documentation built on May 14, 2019, 4:01 a.m.
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Description Usage Arguments Value Examples
Description
Check distance requirment on all read pair appeared in prePair list
Usage
1 | checkDistanceAllReadPair(prePair, maxDistance)
|
Arguments
prePair |
read pairs met before quirments |
maxDistance |
The distance requirment |
Value
A list with possible read pairs
Examples
1 2 3 | dupFiltedBedFile2 <- readRDS(system.file('extdata', 'dupFiltedBedFile2.Rda', package = 'BreakViz'))
prePair <- combineSameRead(bedFile2, dupFiltedBedFile2)
checkDistanceAllReadPair(prePair, maxDistance)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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