PlotPCA: Perform PCA
In YosefLab/SymSim: Simulate Single Cell RNA Sequencing Data
View source: R/benchmark_functions.R
PlotPCA R Documentation
Perform PCA
Description
This function takes the ground truth (meta), the expresssion matrix (data), and performs tSNE, saves the result to a jpeg file with user specified name
Usage
PlotPCA(meta, data, plotname, label, discrete = T, saving = F)
Arguments
meta:
simulation parameters
data:
expression matrix
plotname:
the name of the jpeg file
label:
the column name of the meta data that the points needs to be colored by
YosefLab/SymSim documentation built on Sept. 30, 2024, 2:22 p.m.
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View source: R/benchmark_functions.R
| PlotPCA | R Documentation |
Perform PCA
Description
This function takes the ground truth (meta), the expresssion matrix (data), and performs tSNE, saves the result to a jpeg file with user specified name
Usage
PlotPCA(meta, data, plotname, label, discrete = T, saving = F)
Arguments
meta: |
simulation parameters |
data: |
expression matrix |
plotname: |
the name of the jpeg file |
label: |
the column name of the meta data that the points needs to be colored by |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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