cal_amp_bias: Simulate technical biases
In YosefLab/SymSim: Simulate Single Cell RNA Sequencing Data
View source: R/simulation_functions.R
cal_amp_bias R Documentation
Simulate technical biases
Description
Simulate technical biases
Usage
cal_amp_bias(lenslope, nbins, gene_len, amp_bias_limit)
Arguments
lenslope
amount of length bias. This value sould be less than 2*amp_bias_limit[2]/(nbins-1)
nbins
number of bins for gene length
gene_len
transcript length of each gene
amp_bias_limit
range of amplification bias for each gene, a vector of length ngenes
YosefLab/SymSim documentation built on Sept. 30, 2024, 2:22 p.m.
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View source: R/simulation_functions.R
| cal_amp_bias | R Documentation |
Simulate technical biases
Description
Simulate technical biases
Usage
cal_amp_bias(lenslope, nbins, gene_len, amp_bias_limit)
Arguments
lenslope |
amount of length bias. This value sould be less than 2*amp_bias_limit[2]/(nbins-1) |
nbins |
number of bins for gene length |
gene_len |
transcript length of each gene |
amp_bias_limit |
range of amplification bias for each gene, a vector of length ngenes |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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