getTagMatrix.internal: getTagMatrix.internal
In YuLab-SMU/ChIPseeker: ChIPseeker for ChIP peak Annotation, Comparison, and Visualization
getTagMatrix.internal R Documentation
getTagMatrix.internal
Description
calculate the tag matrix
Usage
getTagMatrix.internal(peak, weightCol = NULL, windows, ignore_strand = FALSE)
Arguments
peak
peak file or GRanges object
weightCol
column name of weight, default is NULL
windows
a collection of region with equal size, eg. promoter region.
ignore_strand
ignore the strand information or not
Value
tagMatrix
Author(s)
G Yu
YuLab-SMU/ChIPseeker documentation built on Feb. 11, 2024, 5:22 p.m.
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| getTagMatrix.internal | R Documentation |
getTagMatrix.internal
Description
calculate the tag matrix
Usage
getTagMatrix.internal(peak, weightCol = NULL, windows, ignore_strand = FALSE)
Arguments
peak |
peak file or GRanges object |
weightCol |
column name of weight, default is NULL |
windows |
a collection of region with equal size, eg. promoter region. |
ignore_strand |
ignore the strand information or not |
Value
tagMatrix
Author(s)
G Yu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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