getTagMatrix2.binning.internal: internal function

In YuLab-SMU/ChIPseeker: ChIPseeker for ChIP peak Annotation, Comparison, and Visualization

internal function

Description

internal function

Usage

getTagMatrix2.binning.internal(
  peak,
  weightCol = NULL,
  windows,
  windows_name,
  nbin = 800,
  upstream = NULL,
  downstream = NULL,
  ignore_strand = FALSE
)

Arguments

peak	peak peak file or GRanges object
weightCol	column name of weight, default is NULL
windows	a collection of region
windows_name	the name of windows
nbin	the amount of nbines
upstream	the distance of upstream extension
downstream	the distance of downstream extension
ignore_strand	ignore the strand information or not

YuLab-SMU/ChIPseeker documentation built on Feb. 11, 2024, 5:22 p.m.