Files in YutongWangUMich/corgi

CORGI: Curve-fit Objective Ranking of Gene Importance.

.Rbuildignore

.gitignore

DESCRIPTION

LICENSE.md

NAMESPACE

R/Seurat_CCA_GeneLoading.R R/benchmarking.R R/dimensionality_reduction.R R/gene_set_manipulators.R R/plotting.R R/run_corgi.R R/utilities.R README.md

corgi.Rproj

data/corgi_output.rda

docs/LICENSE-text.html

docs/LICENSE.html

docs/articles/corgi.html

docs/articles/corgi_files/figure-html/comparison-1.png

docs/articles/corgi_files/figure-html/unnamed-chunk-11-1.png

docs/articles/index.html

docs/authors.html

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/link.svg

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/HDG_ranking.html

docs/reference/Seurat_CCA_GeneLoading.html

docs/reference/batch_mixing.html

docs/reference/batch_separation-1.png

docs/reference/batch_separation-2.png

docs/reference/batch_separation.html

docs/reference/combine_sces.html

docs/reference/corgi.html

docs/reference/corgi_select_genes.html

docs/reference/dhillon_emb.html

docs/reference/get_axes_legend-1.png

docs/reference/get_axes_legend.html

docs/reference/get_color_legend.html

docs/reference/get_compared_gene_sets.html

docs/reference/get_gene_set_of_size_n.html

docs/reference/get_membership_labels_from_set_list.html

docs/reference/get_scatterplots.html

docs/reference/get_shape_legend.html

docs/reference/hello.html

docs/reference/index.html

docs/reference/plot_dimensionality_reduction.html

docs/reference/plot_two_dfs-1.png

docs/reference/plot_two_dfs.html

docs/reference/run_cluster_coherence_comparison.html

docs/reference/run_corgi.html

docs/reference/run_diagnostics.html

docs/reference/run_mapping_accuracy_comparison.html

docs/reference/run_par.html

docs/reference/run_par_fs.html

docs/reference/run_scmap.html

docs/reference/run_scmapCell.html

docs/reference/run_scmapCluster.html

docs/reference/sample_cells.html

docs/reference/select_outlier_corgi_genes.html

docs/reference/select_top_corgi_genes.html

docs/reference/spearman_rho_mds-1.png

docs/reference/spearman_rho_mds.html

docs/reference/top_n_genes.html

man/HDG_ranking.Rd man/Seurat_CCA_GeneLoading.Rd man/batch_separation.Rd man/combine_sces.Rd man/corgi.Rd man/corgi_select_genes.Rd man/dhillon_emb.Rd man/get_axes_legend.Rd man/get_color_legend.Rd man/get_compared_gene_sets.Rd man/get_membership_labels_from_set_list.Rd man/get_scatterplots.Rd man/get_shape_legend.Rd man/plot_dimensionality_reduction.Rd man/run_mapping_accuracy_comparison.Rd man/run_par_fs.Rd man/run_scmapCell.Rd man/run_scmapCluster.Rd man/sample_cells.Rd man/spearman_rho_mds.Rd man/top_n_genes.Rd

vignettes/.gitignore

vignettes/corgi.Rmd

YutongWangUMich/corgi documentation built on Oct. 26, 2019, 1:13 p.m.