Files in YutongWangUMich/corgi
CORGI: Curve-fit Objective Ranking of Gene Importance.

.Rbuildignore
.gitignore
DESCRIPTION
LICENSE.md
NAMESPACE
R/Seurat_CCA_GeneLoading.R R/benchmarking.R R/dimensionality_reduction.R R/gene_set_manipulators.R R/plotting.R R/run_corgi.R R/utilities.R README.md
corgi.Rproj
data/corgi_output.rda
docs/LICENSE-text.html
docs/LICENSE.html
docs/articles/corgi.html
docs/articles/corgi_files/figure-html/comparison-1.png
docs/articles/corgi_files/figure-html/unnamed-chunk-11-1.png
docs/articles/index.html
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/HDG_ranking.html
docs/reference/Seurat_CCA_GeneLoading.html
docs/reference/batch_mixing.html
docs/reference/batch_separation-1.png
docs/reference/batch_separation-2.png
docs/reference/batch_separation.html
docs/reference/combine_sces.html
docs/reference/corgi.html
docs/reference/corgi_select_genes.html
docs/reference/dhillon_emb.html
docs/reference/get_axes_legend-1.png
docs/reference/get_axes_legend.html
docs/reference/get_color_legend.html
docs/reference/get_compared_gene_sets.html
docs/reference/get_gene_set_of_size_n.html
docs/reference/get_membership_labels_from_set_list.html
docs/reference/get_scatterplots.html
docs/reference/get_shape_legend.html
docs/reference/hello.html
docs/reference/index.html
docs/reference/plot_dimensionality_reduction.html
docs/reference/plot_two_dfs-1.png
docs/reference/plot_two_dfs.html
docs/reference/run_cluster_coherence_comparison.html
docs/reference/run_corgi.html
docs/reference/run_diagnostics.html
docs/reference/run_mapping_accuracy_comparison.html
docs/reference/run_par.html
docs/reference/run_par_fs.html
docs/reference/run_scmap.html
docs/reference/run_scmapCell.html
docs/reference/run_scmapCluster.html
docs/reference/sample_cells.html
docs/reference/select_outlier_corgi_genes.html
docs/reference/select_top_corgi_genes.html
docs/reference/spearman_rho_mds-1.png
docs/reference/spearman_rho_mds.html
docs/reference/top_n_genes.html
man/HDG_ranking.Rd man/Seurat_CCA_GeneLoading.Rd man/batch_separation.Rd man/combine_sces.Rd man/corgi.Rd man/corgi_select_genes.Rd man/dhillon_emb.Rd man/get_axes_legend.Rd man/get_color_legend.Rd man/get_compared_gene_sets.Rd man/get_membership_labels_from_set_list.Rd man/get_scatterplots.Rd man/get_shape_legend.Rd man/plot_dimensionality_reduction.Rd man/run_mapping_accuracy_comparison.Rd man/run_par_fs.Rd man/run_scmapCell.Rd man/run_scmapCluster.Rd man/sample_cells.Rd man/spearman_rho_mds.Rd man/top_n_genes.Rd
vignettes/.gitignore
vignettes/corgi.Rmd
YutongWangUMich/corgi documentation built on April 8, 2019, 10:29 p.m.