combine_sces: Combine several SingleCellExperiment objects

Description Usage Arguments Value

View source: R/utilities.R

Description

Combine several SingleCellExperiment objects

Usage

1
combine_sces(sce_list, cell_type_use = "cell_type1", ...)

Arguments

sce_list

a list of SingleCellExperiment objects

cell_type_use

the name of the colData to be used for cell_type, must be available for each member of the list

...

addition parameters passed to the factors

Value

a list with three objects: combined the combined count data, cell_type concatenated cell types, batch the batch labels


YutongWangUMich/corgi documentation built on Oct. 26, 2019, 1:13 p.m.